CDS
| Accession Number | TCMCG051C27907 |
| gbkey | CDS |
| Protein Id | XP_024464471.1 |
| Location | join(6144448..6145002,6145417..6145709,6145801..6145867,6145946..6146216,6146316..6146512,6146588..6146806,6146893..6147006,6147096..6147206,6147326..6147490,6147588..6147929,6148035..6148168,6148260..6148635,6148709..6148895,6148976..6149025,6149126..6149536,6149655..6149847,6149937..6150010,6150127..6150238,6150502..6151082) |
| Gene | LOC7467340 |
| GeneID | 7467340 |
| Organism | Populus trichocarpa |
Protein
| Length | 1483aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA17973 |
| db_source | XM_024608703.1 |
| Definition | DNA topoisomerase 2 isoform X1 [Populus trichocarpa] |
EGGNOG-MAPPER Annotation
| COG_category | B |
| Description | Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03032 [VIEW IN KEGG] ko03036 [VIEW IN KEGG] |
| KEGG_ko |
ko:K03164
[VIEW IN KEGG] |
| EC |
5.99.1.3
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway |
ko01524
[VIEW IN KEGG] map01524 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGGCGGCAGAGACAAAGAAAATCCCATTATCAACAAGCGACAGCTTAAATATGAACCAGGAAAAGACAATCGAAGAAACCTACCAGAAAAAGTCCCAATTGGAGCACATTCTTCTGCGACCCGACACCTACATCGGGTCAATCGAGAAGCACGCGCAGATCCTCTGGGTTTTCGAGAATGATAAAATGGTCCACCGATCGGTTACTTATGTACCGGGACTTTATAAAATCTTTGATGAAATATTGGTGAATGCAGCGGATAATAAGCAAAGAGACCCGAAAATGGATTCTTTGAAGGTTGTGATTGATGTGGAGAATAATTTGGTTAGTGTTTATAACAATGGAGATGGGGTTCCGGTGGATATGCACAAGGAGGAAGGAGTTTATGTGCCCGAACTGATTTTTGGGCATTTGTTGACTAGTAGTAATTATGATGATACGATGAAGAAGACTACTGGTGGGAGAAATGGATATGGTGCTAAGCTTACGAATATTTTTTCGACCGAGTTTGTGATTGAGACGGCTGATGGGAAAAGGAAAAAGAAGTATAAGCAGGTTTTCTCTAACAACATGGGGAAAAGATCTGAGCCGATAATAACTAAGTGCAAGGAGAGTGAGAATTGGACCAAGGTGACATTTAAGCCCGATTTGGCTAAGTTTAGCATGACTCACCTGGAAGAAGATGTGGTAGCTCTGATGAAAAAAAGGGTGGTTGACATGGCTGGTTGCCTTGGAAAGACTGTCAAGGTTGAGCTCAATGGAAGTCGTGTTCCTGTCAAATCATTTCAAGATTACGTTAACATGTACTTGAATTCTGCCGCTGAGTCTGGCTCAGAACGCCCAAAATGTTTCTACGATAAAGTTGGTGAGAGGTGGGAGGTTTGTGTGAGCCTTACTGAAGGTCAATTCCAGCAGGCCAGCTTCGTTAATGGCATTGCCACCATCAAGGGTGGAACTCATGTTGATTACGTCACTAATCAGATCACTAACTATGTGATGAATGCTGTTAATAAGAAGCACAAGAATGGCAACATCAAAGCCCATAATGTGAAGAACTATTTGTGGGTTTTTGTCAATTGCCTTATTGATAACCCTGCTTTTGATTCTCAAACAAAAGAAACTTTGACACTTCGCCAGAGCAGTTTTGGATCAAAATGTGAACTTTCTGAAGACTTCTTGAAGAAAGTGGCAAAGTCTGACATCGTTGACAACCTCCTTTCGTGGGCAAAATTCAAGGAAAACAAAGAGCTTAAGAAAACTGACGGAACAAAGACAGCAAAGGTTAATGTGCCAAAGCTTGAGGATGCTAACGAGGCTGGAGGGAGGTATTCTGAAAAATGCACTTTGATATTGACAGAAGGAGATTCGGCAAAAGCTCTGGCAATTGCTGGTGTGGCTGGGCTGTCTCAGATGGAACGGAACTTCTACGGGGTATTCCCTTTGAGAGGTAAATTGCTCAATGTGCGAGAAGCCACGTCTAAACAGCTCAAAGAGAATAAGGAAATTGAGAGCATCAAGAAGATTCTTGGGTTACAGCATGATAAACAGTACAGCAATGTCAAGTCTTTGAGATACGGTCATCTGATGATAATGACAGATCAGGATCATGATGGGTCTCACATTAAAGGCCTACTGATCAATTTCATTCATTCATTCTGGCCATCATTACTGAAAGTCCCATCTTTCTTGGTTGAGTTTATAACTCCTATTGTCAAGGCTACTCATAGAAATGGAACAGTTCTATCCTTTTATTCCATGCCGGAGTATGAATACTGGAAGGAAAGTTTGAGTGGGAATGCAAGTGGCTGGTCCATCAAATACTATAAGGGGTTGGGAACAAGTACATCCAAGGAAGGAAAAGATTACTTTAAAAACCTTCACAAGCACAAAAAAGACTTTTTATGGATGGATGAGCTGGACGGGGATGCGATAGAGCTTGCGTTTAGTAAAAAGAAGATTGAAGCAAGGAAGAATTGGCTTCGGCAGCATGAGCCTGGTACTCACCTTGATCACAATCAGAAGATCATAAAGTACAGTGACTTCATTAACAAGGAGCTTATATTGTTTTCTATGGCGGATCTTCAAAGGTCCATACCTTCAATGGTTGATGGCCTGAAGCCTGGTCAGAGGAAGATCCTTTTCTGTTCTTTTAAGAGGAATTTTGTCAAAGAAGCAAAAGTTTCCCAGTTTTCTGGTTATGTATCCGAGCATTCTGCTTATCATCATGGAGAGCAGAGTCTTGCCGGTACCATCATTGGAATGGCACAAGATTTTGTTGGCAGTAACAACATTAACCTTCTTCAGCCAAATGGTCAATTTGGCACTCGCAGTGTGGGAGGCAAAGACCATGCAAGTGCTAGGTACATTTATACGCAGCTTTCTCCTATTACAAGGTTCTTGTTCCCAAAGGATGATGATGGCCTTCTTAACTACTTGGATGAAGATGGGCAAACCATTGAACCTACTTGGTACATGCCAATTATACCAACGGTCCTTGTAAACGGTTGTGAAGGAATCGGCACTGGCTGGAGCACTTTCATCCCTAACTATAACCCAAGGGATGTTGTTGCAAATATAAGGCGGTTGTTGAATGGTGAAATGATGGAGCCTATGAATCCATGGTATAGAGGTTTTAAAGGAACTATTGAAAAAGGTGCATCCAAGGAAGGTGGTTGTAGTAGCTACACAGTAAATGGAGTCATTAACGAAGTCAATGAGACAACACTCAGGATAACTGAACTGCCTATCCGTAGATGGACTGATGATTACAAGGCATTTTTGAATTCGGTTACAGAGGGGACTAGAGATGAAAATGGCAATTTACCAAAAGATCCCTTCGTTAAGGATTTCAGAAAGTATGGTGATGATGCTGCTGTACATTTTGAAGTTCAGTTGTCGGAAGAGAACATGCTGGTTGCAAAGCAAGAGGGTTTGCTAAAGAAATTTAAATTAACTACCACAATTAGTACGAGTAACATGCACCTCTTTGATTCAGCAGGGGTGATTAAGAAATATGACAACCCTGAACAAATTCTTGAAAATTTTTTCCACTTACGGCTTGAATACTACGAGACAAGGAAGAAAGTTCTGCTGGAAAATCTAGAATTTGAGTTGTTGAAATTGGAAAACAAGGTCAGGTTTATCCTTGGAGTTGTGAGAGGGGAAATCATTGTGAACAACAGGAAAAGAGCCGATCTGTTACTGGAGTTGCACCAGAAAGGTTTTAACGCCATTCCAAAGAAATCTAAGGCTGTTGTTGCTGGGGCAACTGACGATACAGAAGAAGCAGAAGACAGCCCTGATGTTTCTGGAGTGCGGGCTAGTGACTATGATTATTTGCTGTCAATGGCAATTGGAACCTTGACACTTGAGAGGGTTCAACAGCTATGTGCTGACCGGGACAAACTGAATGGGGAGGTTGACAGTTTAAGGAAGACAACTCCGAAAGTTTTGTGGGTGAAAGATCTCGAGGCTCTTGAGATGCAACTTGATATGCTGGATGAATATGATGCTGAAGCAGAGGAGGCAAGAAGGAAATTAAAAGGTGGTGGTGCAAAGGGTGAAGCTGGTTTTAAGGTTTCTAAACAAGCACCTAAATATCCACGGAAGAACACTAAGAAAGCCATAAACGAAGAAGTATCTGTTGAGACCACAGGAACATCATCCAGTTTTGCAATTGAAACAGCGTCGTCAGAGAATGCTGCTGCGGTAGTGAAACCCAAAGGAAGGGCAGGCTCAAAGAAGGCTCCTGCTAAAATGCAGGAAAAACTCTCTCCAGTTTTGGATGACTTTGATGAGGATGATGAAATAGAATCTCTGAAGGATCGACTTAATGCATATAGACTTGATTCTTCGCCTGAGCAATCAGCTGATATGGAAACTGATGTGCTACAAGTACCAGCTAGGAGAGGTGCTGCTCGGAAGAAGCCTCTAGCAAATGTTTCAGTGATCTCTGATAGTGAGGATGAACCAAACCTTGACGATGACGCTGATGTAGAAGTGAAAGCTTTACCAGAAACAAAAAAGAAGGGGGGCAGAAAAGCTGCTGCTGCAAATGACAAGGCAGCCAAACCACCTGCAGCAACAAAGAGGAGAGGACCGGCCAGCCAGCAGTCCCAGGGATTGGGCCAGAAACTTCTAACGGAAATGTTGAAGCCTGCTGAAGGAGCAGGAATATCTCCAGAAAAGAAAGTGAGGAAAGTGAGGGCATCTCCATTCAACAAGAAGAGTGGTTCTGTGTTGGGCAGAATTCACAAGGAAGATGATACTGGAAGTGAACCGATGTCAGCTTCTTCATCTGAAAACACTGATGTCATTGACGTCCCGGCAAGAGCAAGACCACAGAGGGCAAACCGGAAGCAGACTAGGTACGTGCTGAGTGACTCTGAGAGTGAGAAGGAAGACTCTGATTTTGAGCAGGCTAATGATGATTCAGACTCTTCCTCTGACTAG |
| Protein: MAAETKKIPLSTSDSLNMNQEKTIEETYQKKSQLEHILLRPDTYIGSIEKHAQILWVFENDKMVHRSVTYVPGLYKIFDEILVNAADNKQRDPKMDSLKVVIDVENNLVSVYNNGDGVPVDMHKEEGVYVPELIFGHLLTSSNYDDTMKKTTGGRNGYGAKLTNIFSTEFVIETADGKRKKKYKQVFSNNMGKRSEPIITKCKESENWTKVTFKPDLAKFSMTHLEEDVVALMKKRVVDMAGCLGKTVKVELNGSRVPVKSFQDYVNMYLNSAAESGSERPKCFYDKVGERWEVCVSLTEGQFQQASFVNGIATIKGGTHVDYVTNQITNYVMNAVNKKHKNGNIKAHNVKNYLWVFVNCLIDNPAFDSQTKETLTLRQSSFGSKCELSEDFLKKVAKSDIVDNLLSWAKFKENKELKKTDGTKTAKVNVPKLEDANEAGGRYSEKCTLILTEGDSAKALAIAGVAGLSQMERNFYGVFPLRGKLLNVREATSKQLKENKEIESIKKILGLQHDKQYSNVKSLRYGHLMIMTDQDHDGSHIKGLLINFIHSFWPSLLKVPSFLVEFITPIVKATHRNGTVLSFYSMPEYEYWKESLSGNASGWSIKYYKGLGTSTSKEGKDYFKNLHKHKKDFLWMDELDGDAIELAFSKKKIEARKNWLRQHEPGTHLDHNQKIIKYSDFINKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFVKEAKVSQFSGYVSEHSAYHHGEQSLAGTIIGMAQDFVGSNNINLLQPNGQFGTRSVGGKDHASARYIYTQLSPITRFLFPKDDDGLLNYLDEDGQTIEPTWYMPIIPTVLVNGCEGIGTGWSTFIPNYNPRDVVANIRRLLNGEMMEPMNPWYRGFKGTIEKGASKEGGCSSYTVNGVINEVNETTLRITELPIRRWTDDYKAFLNSVTEGTRDENGNLPKDPFVKDFRKYGDDAAVHFEVQLSEENMLVAKQEGLLKKFKLTTTISTSNMHLFDSAGVIKKYDNPEQILENFFHLRLEYYETRKKVLLENLEFELLKLENKVRFILGVVRGEIIVNNRKRADLLLELHQKGFNAIPKKSKAVVAGATDDTEEAEDSPDVSGVRASDYDYLLSMAIGTLTLERVQQLCADRDKLNGEVDSLRKTTPKVLWVKDLEALEMQLDMLDEYDAEAEEARRKLKGGGAKGEAGFKVSKQAPKYPRKNTKKAINEEVSVETTGTSSSFAIETASSENAAAVVKPKGRAGSKKAPAKMQEKLSPVLDDFDEDDEIESLKDRLNAYRLDSSPEQSADMETDVLQVPARRGAARKKPLANVSVISDSEDEPNLDDDADVEVKALPETKKKGGRKAAAANDKAAKPPAATKRRGPASQQSQGLGQKLLTEMLKPAEGAGISPEKKVRKVRASPFNKKSGSVLGRIHKEDDTGSEPMSASSSENTDVIDVPARARPQRANRKQTRYVLSDSESEKEDSDFEQANDDSDSSSD |